Gene

evi5b

ID

ZDB-GENE-041111-244

Name

ecotropic viral integration site 5b

Symbol

evi5b Nomenclature History

Previous Names

evi5
im:7145726
zgc:123024

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to have GTPase activator activity and Rab GTPase binding activity. Predicted to be involved in activation of GTPase activity and intracellular protein transport. Predicted to localize to integral component of membrane. Orthologous to human EVI5 (ecotropic viral integration site 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7145726 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With evi5b Human Ortholog

No data available

Associated With evi5b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000195	Rab-GAP-TBC domain
Family	IPR050302	Rab GTPase-activating TBC domain-containing protein
Homologous_superfamily	IPR035969	Rab-GAP-TBC domain superfamily

Domain Details Per Protein

Protein	Length	Rab-GAP-TBC domain	Rab-GAP-TBC domain superfamily	Rab GTPase-activating TBC domain-containing protein
UniProtKB:A0A8M3ATF5 InterPro	766
UniProtKB:A0A8M9Q6V1 InterPro	837
UniProtKB:A0A8M2BDD7 InterPro	778
UniProtKB:E7FA51 InterPro	778
UniProtKB:A0A8M9PMV1 InterPro	789
UniProtKB:A0A8M3ATD7 InterPro	837
UniProtKB:A0A8M9P979 InterPro	765
UniProtKB:A0A8M6Z7F9 InterPro	789
UniProtKB:A0A8M9Q6V5 InterPro	766
UniProtKB:A0A8M9QG30 InterPro	809
UniProtKB:A0A8M3B0H6 InterPro	809

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	evi5b-201 (1) Ensembl	Ensembl	2,295 nt	Select Tool ZFIN BLAST
mRNA	evi5b-202 (1) Ensembl	Ensembl	2,729 nt	Select Tool
mRNA	evi5b-207 (1) Ensembl	Ensembl	2,118 nt	Select Tool ZFIN BLAST
mRNA	evi5b-208 (1) Ensembl	Ensembl	2,301 nt	Select Tool ZFIN BLAST
mRNA	evi5b-209 (1) Ensembl	Ensembl	2,397 nt	Select Tool ZFIN BLAST
ncRNA	evi5b-002 (1) Ensembl	Ensembl	2,520 nt	Select Tool
ncRNA	evi5b-003 (1) Ensembl	Ensembl	932 nt	Select Tool
ncRNA	evi5b-004 (1) Ensembl	Ensembl	387 nt	Select Tool
ncRNA	evi5b-005 (1) Ensembl	Ensembl	526 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations